Return to main results Retrieve Phyre Job Id

Job DescriptionP07013
Confidence92.49%DateThu Jan 5 10:59:59 GMT 2012
Rank30Aligned Residues64
% Identity11%Templatec1ynxA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.........40.........50.........60.........70.......
Predicted Secondary structure 








...











Query SS confidence 





















. . .





















































Query Sequence  TNRLVLSGTVCRAPLRKVSPSG. . . IPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGF
Query Conservation   
 
 
 
 
  




 
  
...  
  
 

        
        
 

  
  

     
 

  
 
 
 
Alig confidence 





















...







............

































Template Conservation     
 
  

  
   
        
    
 
............ 
  
 
   
       
   
  
 

 

 
Template Sequence  QNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNF. . . . . . . . . . . . LDTSGEIRATAFNDFATKFNEILQEGKVYYVSKA
Template Known Secondary structure  T



SS
............TT
S
SSSS
Template Predicted Secondary structure 









............


















Template SS confidence 














































































   194.....200.........210.........220...... ...230.........240.........250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions