 |
Job Description | P07013 | Confidence | 20.35% | Date | Thu Jan 5 10:59:59 GMT 2012 |
Rank | 65 | Aligned Residues | 73 |
% Identity | 18% | Template | c1n9wA_ |
PDB info |
PDB header:biosynthetic protein | Chain: A: PDB Molecule:aspartyl-trna synthetase 2; |
PDBTitle: crystal structure of the non-discriminating and archaeal-2 type aspartyl-trna synthetase from thermus thermophilus
|
Resolution | 2.30 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | V | L | S | G | T | V | C | R | A | P | L | R | K | V | S | P | S | G | I | P | H | C | Q | F | V | L | E | H | R | S | V | Q | E | E | A | G | F | H | R | Q | A | W | C | Q | M | P | V | I | V | S | G | H | E | N | Q | A | I | T | H | S | I | T | V | G | S | R | I | T | V | Q | G | F | I | S | C | H | K | A |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . | . |
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|   |   | . | . | . |
|
|   | . | . |   |
| . |
|
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|
|   |
|   |
|   |
|   |
|   | . | . |   |   |
Template Sequence |   |
E | V | E | L | L | G | F | L | H | W | . |
. |
. |
R | R | D | . |
. |
L | G | . |
R | I | Q | F | L | L | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | D | R | S | G | V | V | Q | V | V | T | G | G | L | . |
. |
. |
. |
. |
. |
K | L | P | L | P | E | S | A | L | R | V | R | G | L | V | V | . |
. |
E | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | . | . |
| S | . | S |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T |  |  |  |  |  |  |  |  | S |
| . | . | . | . | . | . |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  | . | . |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
| . | . |
|
| . |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | |
|
. | . | |
30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | G | L | S | K | M | V | L | H | A | E | Q | I | E | L | I | D | S |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|
|   |   |
Template Sequence |   |
A | K | A | P | G | G | L | E | V | Q | A | K | E | V | E | V | L | S | P |
Template Known Secondary structure |   |
T | T | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|