Job Description P07013 Confidence 6.95% Date Thu Jan 5 10:59:59 GMT 2012 Rank 100 Aligned Residues 75 % Identity 9% Template c1jb7A_ PDB info PDB header:dna-binding protein/dna Chain: A: PDB Molecule:telomere-binding protein alpha subunit; PDBTitle: dna g-quartets in a 1.86 a resolution structure of an oxytricha nova2 telomeric protein-dna complex Resolution 1.86 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure					.																																				.
Query SS confidence					.																																				.
Query Sequence		M	T	N	.	R	L	V	L	S	G	T	V	C	R	A	P	L	R	K	V	S	P	S	G	I	P	H	C	Q	F	V	L	E	H	R	S	V	Q	E	.	E	A	G	F	H	R	Q	A	W	C	Q	M	P	V	I	V	S	G	H	E	N	Q	A	I	T	H	S	I	T	V	G	S	R	I	T	V	Q
Query Conservation					.																																				.
Alig confidence					.																																				.
Template Conservation
Template Sequence		T	S	A	Q	P	Q	H	F	Y	A	V	V	I	D	A	T	F	P	Y	K	T	N	Q	E	R	Y	I	C	S	L	K	I	V	D	P	T	L	Y	L	K	Q	Q	K	G	A	G	D	A	S	D	Y	A	T	L	V	L	Y	A	K	R	F	E	D	L	P	I	I	H	R	A	G	D	I	I	R	V	H
Template Known Secondary structure		S			S																		S	S	S										B	T	T	B	S	B			T	T	S	S		S		B										S	S	G	G	G	S							T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions