Job Description P0AAA7 Confidence 1.17% Date Thu Jan 5 11:12:23 GMT 2012 Rank 86 Aligned Residues 164 % Identity 10% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	Q	M	G	I	A	W	G	N	L	L	L	A	L	M	K	G	F	R	D	A	A	G	N	A	L	S	L	I	V	G	S	L	I	G	V	L	A	Y	Y	V	S	Y	R	L	G	G	Y	E	G	A	L	L	G	L	A	L	I	P	A	L	V	V	I	P	A	A	I	M	L	I	K	R	G	V	I	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L
Template Known Secondary structure																				T	T		S	S	S					G	G	G																T	T			B
Template Predicted Secondary structure
Template SS confidence
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	L	K	P	S	W	D	N	G	L	A	G	Q	L	S	K	F	T	L	M	A	L	I	T	S	V	T	L	P	V	A	Y	I	M	M	R	K	L	L	A	A	Q	Y	S	W	D	E	V	G	I	W	Q	G	V	S	S	I	S	D	A	Y	L	Q	F	I	T	A	S	F	S	V	Y	L	L	P	T	L	S	R
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	.	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R
Template Known Secondary structure		T	T	S	S				T	T									T	T																				T	T		S	S	S		.																			T	T	T	T	S	S	S	S	S	S
Template Predicted Secondary structure																																															.
Template SS confidence
		953	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.		.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.
		283	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	S	R	K
Template Known Secondary structure			T	S
Template Predicted Secondary structure
Template SS confidence
		1032	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions