|   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | P | L | V | V | V | E | G | S | R | V | L | G | V | I | A | L | K | D | I | V | K | G | G | I | K | E | R | F | A | Q | L | R | K | M | G | I | K | T | V | M | I | T | G | D | N | R | L | T | A | A | A | I | A | A | E | A | G | V | D | D | F | L | A | E | A | T | P | E | A | K | L | A | L | I | R | Q | Y | Q |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |   |   |   |
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
E | K | V | T | A | V | I | F | D | K | T | G | T | L | T | K | G | K | P | D | T | L | K | E | S | A | K | P | A | V | Q | E | L | K | R | X | G | I | K | V | G | X | I | T | G | D | N | W | R | S | A | E | A | I | S | R | E | L | N | L | D | L | V | I | A | E | V | L | P | H | Q | K | S | E | E | V | K | K | L | Q |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
| B |
| S |
|
|
|
| B |
| T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
416 | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . |
  |
  |   |
508 | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | G | R | L | V | A | M | T | G | D | G | T | N | D | A | P | A | L | A | Q | A | D | V | A | V | A | M | N | S | G | T | Q | A | A | K | E | A | G | N | M | V | D | L | D | S | N | P | T | K | L | I | E | V | V | H |
Query Conservation |   |
  |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . |   |
|   |   |
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|
|
|
Template Sequence |   |
A | K | E | . |
V | V | A | F | V | G | D | G | I | N | D | A | P | A | L | A | Q | A | D | L | G | I | A | V | G | . |
. |
. |
. |
. |
. |
. |
. |
S | G | D | I | V | L | I | R | D | D | L | R | D | V | V | A | A | I | Q |
Template Known Secondary structure |   |
T | T | S | . |
|  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  | S | S |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
| S |  |  |  | S | S |
|
| T |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
| . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
609 | 610 | . | |
. | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . |
  |