Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence99.19%DateThu Jan 5 10:58:08 GMT 2012
Rank46Aligned Residues117
% Identity20%Templated2b30a1
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   448.450.........460.........470.........480.........
Predicted Secondary structure 
















......................................
Query SS confidence 









































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  IVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   

      
  
  


 
 




   

  

   

  ......................................
Alig confidence 









































......................................
Template Conservation   
       
  
   
  
   


             
              
               
         
Template Sequence  KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELI
Template Known Secondary structure 
S
T

SS

T

S
SGGGT
TT





Template Predicted Secondary structure 






























Template SS confidence 















































































   45....50.........60.........70.........80.........90.........100.........110.........120....
 
  
Predicted Secondary structure  ................................................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  SYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN
Template Known Secondary structure  TT
GGGTTTT
TTTTS




TT



S


TTTSTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   490.........500......... 510.........520.........530.........540.........550....
Predicted Secondary structure  ..............



.













Query SS confidence  . . . . . . . . . . . . . .



















.












































Query Sequence  . . . . . . . . . . . . . . FLAEATPEAKLALIRQYQAE. GRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSN
Query Conservation  ..............
 

  

 
  

  

  .
  
 




 





  






  

  
  





    
Alig confidence  ..............



















.












































Template Conservation                      
            
    
   

  

  

  
   


 

    
  
  
     
Template Sequence  KLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH
Template Known Secondary structure  T
TTS
TT

TT

GGG
SGGGS
S
TT

SS
SS
T
Template Predicted Secondary structure 
































Template SS confidence 















































































   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   555 ....560....
Predicted Secondary structure  .
Query SS confidence 
.








Query Sequence  P. TKLIEVVHI
Query Conservation   .  
   
  
Alig confidence 
.








Template Conservation      
   
  
Template Sequence  REGAVAYLLKK
Template Known Secondary structure  TTT
Template Predicted Secondary structure 


Template SS confidence 










   285....290.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions