Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence61.72%DateThu Jan 5 10:58:08 GMT 2012
Rank193Aligned Residues93
% Identity17%Templated2a9pa1
SCOP infoFlavodoxin-like CheY-like CheY-related
Resolution1.82

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   410.........420.........430.... .....440.........450.........460.. .......470.....
Predicted Secondary structure 






.............







.






Query SS confidence 
























. . . . . . . . . . . . .



























.












Query Sequence  GHFPTDVDQKVDQVARQGATPLVVV. . . . . . . . . . . . . EGSRVLGVIALKDIVKGGIKERFAQLRK. MGIKTVMITGDNR
Query Conservation                   
 
 
 

.............     

 
 
 
 

      
  
  .


 
 




  
Alig confidence 
























.............







....















.












Template Conservation 

       
   
   
  
  
     

        



 
 .... 

   
  
   

     


 

    
Template Sequence  DDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDL. . . . MLPEIDGLEVAKTIRKTSSVPILMLSAKDS
Template Known Secondary structure 
S
TT
SS

S
S....S
SSS
TT



S

S
Template Predicted Secondary structure 


















....






















Template SS confidence 















































































   8.10.........20.........30.........40.........50... ......60.........70.........80...
 
   476...480.........490.........500........
Predicted Secondary structure 







Query SS confidence 
































Query Sequence  LTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
Query Conservation   

  

   

  
 

  

 
  

  

 
Alig confidence 

















..












Template Conservation        
   
    
 
..
     
   
  
Template Sequence  EFDKVIGLELGADDYVTK. . PFSNRELQARVKA
Template Known Secondary structure  T
SS..S

Template Predicted Secondary structure 




..


Template SS confidence 
































   84.....90.........100. ........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions