Job Description P03960 Confidence 94.51% Date Thu Jan 5 10:58:08 GMT 2012 Rank 127 Aligned Residues 104 % Identity 26% Template d1yv9a1 SCOP info HAD-like HAD-like NagD-like Resolution 2.80

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		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	G	K	R	F	V	E	R	L	Q	E	K	D	L	P	F	L	F	V	T	N	N	T	T	K	S	P	E	T	V	A	Q	R	L	A	N	E	F	D	I	H	V	P	A	S	L	V	Y	T	A	T	L	A	T	I	D	Y	M	K	E	A	N	R	G	K	K	V	F	V	I	G	E	A	G	L	I	D	L	I
Template Known Secondary structure														T	T											S	S													S						G	G	G																			S						S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
																																																																												488	.	490	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	F	L	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	A	G	F	E	W	D	E	T	N	P	D	Y	V	V	V	G	L	D	T	E	L	S	Y	E	K	V	V	L	A	T	L	A	I	Q	K	G	A	L	F	I	G	T	N	P	D	K	N	I	P	T	E	R	G	L	L	P	G	A	G	S	V	V	T	F	V	E	T	A	T	Q	T	K	P	V	Y	I	G	K
Template Known Secondary structure				T	T					S	S	S		S								T	T															T	T						S				S					T	T																		T							S	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.								.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																													.												.	.	.	.	.	.	.
Query SS confidence																													.												.	.	.	.	.	.	.
Query Sequence		A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E	G	R	L	V	A	M	T	G	D	G	T	.	N	D	A	P	A	L	A	Q	A	D	V	.	.	.	.	.	.	.	A	V	A	M	N	S	G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T
Query Conservation																													.												.	.	.	.	.	.	.
Alig confidence																													.												.	.	.	.	.	.	.																				.	.
Template Conservation																																																																			.	.
Template Sequence		P	K	A	I	I	M	E	R	A	I	A	H	L	G	V	E	K	E	Q	V	I	M	V	G	D	N	Y	E	T	D	I	Q	S	G	I	Q	N	G	I	D	S	L	L	V	T	S	G	F	T	P	K	S	A	V	P	T	L	P	T	P	P	T	Y	V	V	.	.	D	S	L	D
Template Known Secondary structure		T	S													S		G	G	G						S		T	T	T									T							T	T	S	S	S		S	S	S	T	T	T		S	S			S				.	.	S	S	G	G
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions