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Job DescriptionP03960
Confidence99.96%DateThu Jan 5 10:58:08 GMT 2012
Rank15Aligned Residues298
% Identity23%Templated1wpga4
SCOP infoCalcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPGNALFSAAISGWLWITVLFANF
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Template Sequence  VKRHLEKYGHNELPAEEGKSLWELV. IEQFEDLLVRILLLAACISFVLAW. . . . FEEGEETITAFVEPFVILLILIANAI
Template Known Secondary structure  S

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S....TS
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   2930.........40.........50... ......60.........70....... ..80.........90.........100...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGE
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Template Conservation 
   

  
      
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Template Sequence  VGVWQERNAENAIEALKEYEPAATE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S


GGG





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   104.....110.........120........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  SAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLWP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QDKTPLQQKLDEFGEQLSKVISLICVAVWL
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   244.....250.........260.........270...
 
   242.. .....250.........260.........270.........280.........290.........300.........
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Query Sequence  FSA. . . . . . . . . . . . WGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKT
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Template Sequence  INIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET. . . . . . . . . . . .
Template Known Secondary structure 

TTSSS

SSS
SSS
GGGS
TTTTT


S
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   274.....280.........290.........300.........310.........320.........330.........340.
 
   310.........320.........330.........340.........350.........360.........370.........380.........
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Query Sequence  GTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINID
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   390.........400.........410.........420.........430.........440.........450.........460.........
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Query Sequence  NRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   470.........480.........490.........500.........510.........520.........530.........540.........
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Query Sequence  ITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMV
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   550.........560.........570.........580.........590.........600.........610.........620.........
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Query Sequence  DLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFNALIIV
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Template Sequence  . . . . . . . . . . . . . . LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDL
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S



S

TTTTT



S
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   342.......350.........360.........370.........380.........390.........400.......
 
   630.........640.........650.........660.........670.........680
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Query Sequence  FLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCG
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Template Sequence  DIMDRPPRSPKEPLISGWLFFR. . . . . YMAIGGYVGAATVGAAAWWFMYAE
Template Known Secondary structure  GGGGS



TT

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   815....820.........830...... ...840.........850.........860
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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