 |
Job Description | P03960 | Confidence | 31.69% | Date | Thu Jan 5 10:58:08 GMT 2012 |
Rank | 310 | Aligned Residues | 67 |
% Identity | 18% | Template | d1vh3a_ |
SCOP info | Nucleotide-diphospho-sugar transferases
| Nucleotide-diphospho-sugar transferases
| Cytidylytransferase
|
Resolution | 2.70 |
|
 |
  |   |
450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | |
. | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | |
. | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | |
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
K | G | G | I | K | E | R | F | A | Q | L | R | K | M | G | I | . |
K | T | V | M | I | T | G | D | N | R | L | T | A | A | A | I | A | A | E | A | G | V | D | D | F | L | A | E | A | . |
T | P | E | A | K | L | A | L | I | R | Q | Y | Q | A | E | G | R | . |
. |
. |
. |
. |
L | V | A | M | T | G | D |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
| . |   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |
|
|   | . |   |
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   | . | . | . | . | . |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|   |   | . | . |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|
Template Sequence |   |
R | P | X | I | Q | H | V | F | E | K | A | L | Q | S | G | A | S | R | V | I | I | A | T | D | N | . |
. |
E | N | V | A | D | V | A | K | S | F | G | A | E | V | C | X | T | S | V | N | H | N | S | G | T | E | R | L | A | E | V | V | E | K | L | A | I | P | D | N | E | I | I | V | N | I | Q | G | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  | S |
| . | . |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | S |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|