 |
Job Description | P03960 | Confidence | 20.50% | Date | Thu Jan 5 10:58:08 GMT 2012 |
Rank | 423 | Aligned Residues | 118 |
% Identity | 20% | Template | d1ujpa_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 1.34 |
|
 |
  |   |
443 | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | L | K | D | I | V | K | G | G | I | K | E | R | F | A | Q | L | R | K | M | G | I | K | T | V | M | I | T | G | D | N | R | L | T | A | A | A | I | A | A | E | A | G | V | D | D | F | L | A | E | A | T | P | E | A | K | L | A | L | I | R | Q | Y | Q | A | E | G | R | L | V | A | M | T | G | D | G | T | N | D |
Query Conservation |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|
| . |   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
Template Sequence |   |
V | I | L | P | D | L | P | P | D | E | D | P | G | L | V | R | L | A | Q | E | I | G | L | E | T | V | F | L | L | A | P | T | S | . |
T | D | A | R | I | A | T | V | V | R | H | A | T | G | F | V | Y | A | V | S | V | E | V | K | D | L | V | R | R | I | K | A | R | T | A | L | P | V | A | V | G | F | G | V | S | G |
Template Known Secondary structure |   |
 |  |
| T | T |
|
| G | G | G |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
|  |  |
| T | T |
| . |
|  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  | S |
|
|
| S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
  |
  |   |
523 | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | A | L | A | Q | A | D | V | A | V | A | M | N | S | G | T | Q | A | A | K | E | A | G | N | M | V | D | L | D | S | N | P | T | K | L | I | E | V | V | H | I | G |
Query Conservation |   |
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
K | A | T | A | A | Q | A | A | V | A | D | G | V | V | V | G | S | A | L | V | R | A | L | E | E | . |
. |
. |
. |
G | R | S | L | A | P | L | L | Q | E | I | R | Q | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S | S |  |  |  |  |
|  |  |  |  |  |  |  |  | T | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|