 |
Job Description | P03960 | Confidence | 21.89% | Date | Thu Jan 5 10:58:08 GMT 2012 |
Rank | 408 | Aligned Residues | 36 |
% Identity | 17% | Template | d1qpza1 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| GalR/LacI-like bacterial regulator
|
Resolution | 2.50 |
|
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | A | A | I | A | A | E | A | G | V | D | . |
. |
. |
. |
. |
. |
. |
. |
D | F | L | A | E | A | T | P | E | A | K | L | A | L | I | R | Q | Y | Q | A | E | G | R | L |
Query Conservation |   |
|
|   |   |
|
|   |   |   |
|
|   | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
T | I | K | D | V | A | K | R | A | N | V | S | T | T | T | V | S | H | V | I | N | K | T | R | F | V | A | E | E | T | R | N | A | V | W | A | A | I | K | E | L | H | Y | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|