Job Description P03960 Confidence 30.84% Date Thu Jan 5 10:58:08 GMT 2012 Rank 317 Aligned Residues 128 % Identity 15% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.				.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.			.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																																				.	.	.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	G	V	I	A	L	K	D	I	V	K	G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	.	.	.	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	D	.	.	D	F	L	A	E	A	T	P	E	A	K	L	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	L	L	M	Y	A	N	L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L
Template Known Secondary structure													T	T													T							T	T			G	G	G											T	T									T	T															S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
																			502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.				.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	R	Q	Y	Q	A	E	G	R	L	V	A	M	T	G	D	G	T	N	.	.	.	D	A	P	A	L	A	Q	A	D	V	.	A	V	A	M	N	S	G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.											.															.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	A	A	P	A	L	Q	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	K	.	.	.	.	.	.	.	.	N	L	A	S	P	K	Q
Template Known Secondary structure			S	S	S	S				S	S	S														T	T								S	S			S										T	T		S															.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	H	I	G	K	Q	M	L	M	T	R	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	A	E	L	R	S	F	V	S	A	M	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions