Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence99.37%DateThu Jan 5 10:58:08 GMT 2012
Rank38Aligned Residues117
% Identity24%Templated1l6ra_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   448.450.........460.........470.........480.........490
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Query Sequence  IVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTS
Template Known Secondary structure 
B
TT

SS
T

S
GGGT
TTS
SS
STTTSS
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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   491........500.........510.........520..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAEATPEAKLALIRQYQAEGRLVAMTGDGTND
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Template Sequence  MRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNND
Template Known Secondary structure 
B

GGGGG
SSSB

GGGTTTTTTT
STT

GGG

SGGG
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   523......530.........540.........550.........560....
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Query Sequence  APALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHI
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Template Sequence  MPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH
Template Known Secondary structure  TSSS
TTS

S
S

TT
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   179180.........190.........200.........210.........220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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