Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence30.37%DateThu Jan 5 10:58:08 GMT 2012
Rank321Aligned Residues97
% Identity18%Templated1dbwa_
SCOP infoFlavodoxin-like CheY-like CheY-related
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   410.........420.........430..... ....440.........450.........460.... .....470........
Predicted Secondary structure 






.........









..




Query SS confidence 

























. . . . . . . . .




























. .













Query Sequence  GHFPTDVDQKVDQVARQGATPLVVVE. . . . . . . . . GSRVLGVIALKDIVKGGIKERFAQLRKMG. . IKTVMITGDNRLTA
Query Conservation                   
 
 
 

 .........    

 
 
 
 

      
  
  

..
 
 




   

Alig confidence 

























.........




























..













Template Conservation 


      
   
   
  
        
         
 

 
  
    
               

  
       
Template Sequence  DDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPM
Template Known Secondary structure  SSTT
S
GGG

S

STTS
TT




TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   479480.........490.........500........
Predicted Secondary structure 







Query SS confidence 





























Query Sequence  AAIAAEAGVDDFLAEATPEAKLALIRQYQA
Query Conservation    

   

  
 

  

 
  

  

 
Alig confidence 














..












Template Conservation         
    
 
..
     
   
  
Template Sequence  AVEAMKAGAVDFIEK. . PFEDTVIIEAIER
Template Known Secondary structure  TT
SS..S

Template Predicted Secondary structure 




..


Template SS confidence 





























   90.........100.... .....110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions