 |
Job Description | P03960 | Confidence | 30.37% | Date | Thu Jan 5 10:58:08 GMT 2012 |
Rank | 321 | Aligned Residues | 97 |
% Identity | 18% | Template | d1dbwa_ |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 1.60 |
|
 |
  |   |
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | |
|
. | . | . | . | . | 470 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | F | P | T | D | V | D | Q | K | V | D | Q | V | A | R | Q | G | A | T | P | L | V | V | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | R | V | L | G | V | I | A | L | K | D | I | V | K | G | G | I | K | E | R | F | A | Q | L | R | K | M | G | . |
. |
I | K | T | V | M | I | T | G | D | N | R | L | T | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
| . | . |
|   |
|   |
|
|
|
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
D | D | E | E | P | V | R | K | S | L | A | F | M | L | T | M | N | G | F | A | V | K | M | H | Q | S | A | E | A | F | L | A | F | A | P | D | V | R | N | G | V | L | V | T | D | L | R | M | P | D | M | S | G | V | E | L | L | R | N | L | G | D | L | K | I | N | I | P | S | I | V | I | T | G | H | G | D | V | P | M |
Template Known Secondary structure |   |
 | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
|  |  |  |  |  |  |  | G | G | G |
|
| S |  |  |  |  |  |  |
|
| S | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
479 | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | I | A | A | E | A | G | V | D | D | F | L | A | E | A | T | P | E | A | K | L | A | L | I | R | Q | Y | Q | A |
Query Conservation |   |
  |   |
|
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|   |
| . | . |
|   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
A | V | E | A | M | K | A | G | A | V | D | F | I | E | K | . |
. |
P | F | E | D | T | V | I | I | E | A | I | E | R |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |  |  |  |  | S | . | . | S |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|