Job Description P03960 Confidence 71.70% Date Thu Jan 5 10:58:08 GMT 2012 Rank 172 Aligned Residues 113 % Identity 12% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.		.	.	.	.	.	.	.	.	480	.	.	.	.	.											.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																										.						.															.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.						.															.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	L	K	D	I	V	K	G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	.	T	V	M	I	T	.	G	D	N	R	L	T	A	A	A	I	A	A	E	A	.	.	.	.	.	.	.	.	.	.	G	V	D	D	F	L	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E	G
Query Conservation																										.						.															.	.	.	.	.	.	.	.	.	.
Alig confidence																										.						.															.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																							.
Template Sequence		L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	.	D	K	V	K	E	I	R	S	F	T
Template Known Secondary structure					T	T			G	G	G												T									T	T	S										T	T			S								S		S	S												.								T	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.					.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		R	L	V	A	M	T	G	D	G	T	N	D	A	P	A	L	A	Q	.	.	.	.	A	D	V	A	V	A	M	N	S	G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E	V	V	H	I
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.			.						.	.										.	.	.	.	.
Template Conservation																										.						.	.										.	.	.	.	.
Template Sequence		N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K	V	A	D	.	G	V	I	V	G	.	.	T	S	I	V	K	C	F	K	Q	.	.	.	.	.	G	N	L	D	I	I	X	K	D	I	E	E
Template Known Secondary structure			S						S	S			S	S							T	T	T	S	S	.						.	.							T	T	S	.	.	.	.	.	S
Template Predicted Secondary structure																										.						.	.										.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.			.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions