Job Description P03960 Confidence 100.00% Date Thu Jan 5 10:58:08 GMT 2012 Rank 6 Aligned Residues 568 % Identity 23% Template c3rfuC_ PDB info PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase Resolution 3.20 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		V	M	F	I	V	W	I	G	S	L	L	T	T	C	I	S	I	A	M	A	S	.	.	.	.	.	.	.	.	.	G	A	M	P	G	N	A	L	F	S	A	A	I	S	G	W	L	W	I	T	V	L	F	A	N	F	A	E	A	L	A	E	G	R	S	K	A	Q	A	N	S	L	K	G	V	K	K	T	A	F
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	F	T	L	I	A	M	G	I	G	V	A	W	I	Y	S	M	V	A	V	L	W	P	G	V	F	P	H	A	F	R	S	Q	E	G	V	V	A	V	Y	F	E	A	A	A	V	I	T	T	L	V	L	L	G	Q	V	L	E	L	K	A	R	E	Q	T	G	S	A	I	R	A	L	L	K	L	V	P	E	S	A
Template Known Secondary structure																								G	G	G	S		S	S	S	S		S	S	S																															S	S						T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	K	L	R	E	P	K	Y	G	A	A	A	D	K	V	P	A	D	Q	L	R	K	G	D	I	V	L	V	E	A	G	D	I	I	P	C	D	G	E	V	I	E	G	G	A	S	V	D	E	S	A	I	T	G	E	S	A	P	V	I	R	E	S	G	G	D	F	A	S	V	T	G	G	T	R	I	L	S	D
Query Conservation
Alig confidence								.	.	.	.																																																									.	.	.
Template Conservation								.	.	.	.																																																									.	.	.
Template Sequence		H	R	I	K	E	D	.	.	.	.	G	S	E	E	E	V	S	L	D	N	V	A	V	G	D	L	L	R	V	R	P	G	E	K	I	P	V	D	G	E	V	Q	E	G	R	S	F	V	D	E	S	M	V	T	G	E	P	I	P	V	A	K	E	A	S	A	.	.	.	K	V	I	G	A	T	I	N	Q	T	G
Template Known Secondary structure						T	T	.	.	.	.								T	T	T			T	T							S	S					S						S	S							S	S	S	T	T		S	S						T	T		.	.	.				T	T					S
Template Predicted Secondary structure								.	.	.	.																																																									.	.	.
Template SS confidence
		228	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		W	L	V	I	E	C	S	V	N	P	G	E	T	F	L	D	R	M	I	A	M	V	E	G	A	Q	R	R	K	T	P	N	E	I	A	L	T	I	L	L	I	A	L	T	I	V	F	L	L	A	T	A	T	L	W	P	F	S	A	W	G	G	.	.	.	.	N	A	V	S	V	T	V	L	V	A	L	L	V	C
Query Conservation																																																																.	.	.	.
Alig confidence																																																																.	.	.	.
Template Conservation
Template Sequence		S	F	V	M	K	A	L	H	V	G	S	D	T	M	L	A	R	I	V	Q	M	V	S	D	A	Q	R	S	R	A	P	I	Q	R	L	A	D	T	V	S	G	W	F	V	P	A	V	I	L	V	A	V	L	S	F	I	V	W	A	L	L	G	P	Q	P	A	L	S	Y	G	L	I	A	A	V	S	V	L	I	I
Template Known Secondary structure											S	T	T	S														S	S																																			S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	P	T	T	I	G	G	L	L	S	A	I	G	V	A	G	M	S	R	M	L	G	A	N	V	I	A	T	S	G	R	A	V	E	A	A	G	D	V	D	V	L	L	L	D	K	T	G	T	I	T	L	G	N	R	Q	A	S	E	F	I	P	A	Q	G	V	D	E	K	T	L	A	D	A	A	Q	L	A	S
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		A	C	P	C	A	L	G	L	A	T	P	M	S	I	M	V	G	V	G	K	G	A	Q	S	G	V	L	I	K	N	A	E	A	L	E	R	M	E	K	V	N	T	L	V	V	D	K	T	G	T	L	T	E	G	H	P	K	L	T	R	I	V	T	.	D	D	F	V	E	D	N	A	L	A	L	A	A	A	L	E
Template Known Secondary structure					S	T																			T	T				S									T	S									B	T	T	T	B		S	S									.	S	S	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	E	T	P	E	G	R	S	I	V	I	L	A	K	Q	R	F	N	L	R	E	R	D	V	Q	S	L	H	A	T	F	V	P	F	T	A	Q	S	R	M	S	G	I	N	I	D	N	R	M	I	R	K	G	S	V	D	A	I	R	R	H	V	E	A	N	G	G	H	F	P	T	D	V	D	Q	K	V	D
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																														.	.	.	.	.
Template Sequence		H	Q	S	E	H	P	L	A	N	A	I	V	H	A	A	K	E	K	G	L	S	L	G	S	V	E	A	F	E	A	P	.	.	.	.	.	.	.	T	G	K	G	V	V	G	Q	V	D	G	H	H	V	A	I	G	N	A	R	L	M	Q	E	H	G	G	D	N	.	.	.	.	.	A	P	L	F	E	K	A	D
Template Known Secondary structure			S	S														T	T								S						.	.	.	.	.	.	.	T	T	T						S	S	S	S						S												.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490								.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.						520	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	R	Q	G	A	T	P	L	V	V	V	E	G	S	R	V	L	G	V	I	A	L	K	D	I	V	K	G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	D	D	F	L	A	E	A	T	P	E	A	K	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	R	G	K	G	A	S	V	M	F	M	A	V	D	G	K	T	V	A	L	L	V	V	E	D	P	I	K	S	S	T	P	E	T	I	L	E	L	Q	Q	S	G	I	E	I	V	M	L	T	G	D	S	K	R	T	A	E	A	V	A	G	T	L	G	I	K	K	V	V	A	E	I	M	P	E	D	K	S	R
Template Known Secondary structure						T	T									T	T												B		S	S												T								S	S													T							S
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	R	Q	Y	Q	A	E	G	R	L	V	A	M	T	G	D	G	T	N	D	A	P	A	L	A	Q	A	D	V	A	V	A	M	N	S	G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E	V	V	H	I	G	K	Q	M	L	M	T	R	G	S	L	T	T	F	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	S	E	L	K	D	K	G	L	I	V	A	M	A	G	D	G	V	N	D	A	P	A	L	A	K	A	D	I	G	I	A	M	G	T	G	T	D	V	A	I	E	S	A	G	V	T	L	L	H	G	D	L	R	G	I	A	K	A	R	R	L	S	E	S	T	M	S	N	I	R	Q	N	L	F	F	A	F	I
Template Known Secondary structure										S									S	S	T	T							S	S						S	S	S		S							S					S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		N	D	V	A	K	Y	F	A	I	I	P	A	A	F	A	A	T	Y	P	Q	L	N	A	L	N	.	I	M	C	L	H	S	P	D	S	A	I	L	S	A	V	I
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		Y	N	V	L	G	V	P	L	A	A	G	V	L	Y	P	L	T	G	L	L	L	S	P	M	I	A	A	A	A	M	A	L	S	S	V	S	V	I	I	N	A	L
Template Known Secondary structure												T	S	S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.