Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence94.53%DateThu Jan 5 10:58:08 GMT 2012
Rank126Aligned Residues113
% Identity17%Templatec3qnmA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   448.450.........460.........470.........480....... ..490.........500.........510......
Predicted Secondary structure 














...........







Query SS confidence 







































. . . . . . . . . . .




























Query Sequence  IVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGV. . . . . . . . . . . DDFLAEATPEAKLALIRQYQAEGRLVAMT
Query Conservation   

      
  
  


 
 




   

  

   

...........  
 

  

 
  

  

  
  
 

Alig confidence 














.























...........




























Template Conservation           
     .                                        
                      
Template Sequence  GLXPHAKEVLEYLAP. QYNLYILSNGFRELQSRKXRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLXI
Template Known Secondary structure 
BSTTTT.TS
S
T
GGG
SGGGTT

TTSTT

GGG
Template Predicted Secondary structure 




.



































Template SS confidence 















































































   105....110......... 120.........130.........140.........150.........160.........170.........180...
 
   517..520 .........530..... . ...540.........550.........560...
Predicted Secondary structure 


.

.
.





Query SS confidence 



.














.
.


























Query Sequence  GDGT. NDAPALAQADVAVAM. N. SGTQAAKEAGNMVDLDSNPTKLIEVVH
Query Conservation 


 .





  






. . 

  
  





       
   
 
Alig confidence 



.














.
.













..










Template Conservation 

    

  
  

   
              
  
.. 

 

   
 
Template Sequence  GDSWEADITGAHGVGXHQAFYNVTERTVFPFQPTYHI. . HSLKELXNLLE
Template Known Secondary structure  S
TTTTTT


S




SS

S..SSTT
Template Predicted Secondary structure 


















..


Template SS confidence 

















































   184.....190.........200.........210.........220 .........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions