Job Description P03960 Confidence 52.74% Date Thu Jan 5 10:58:08 GMT 2012 Rank 211 Aligned Residues 93 % Identity 19% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.														.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		G	H	F	P	T	D	V	D	Q	K	V	D	Q	V	A	R	Q	G	A	T	P	L	V	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	S	R	V	L	G	V	I	A	L	K	D	I	V	K	G	G	I	K	E	R	F	A	Q	L	R	.	K	M	G	I	K	T	V	M	I	T	G	D	N	R
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																.
Template Conservation																																																.	.	.	.
Template Sequence		D	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	.	.	.	.	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	L	T	A	K	T	D
Template Known Secondary structure			S															T	T									G	G	G											S						S	.	.	.	.	S		S	S	S																							T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	A	A	I	A	A	E	A	G	V	D	D	F	L	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M	K	.	.	P	F	K	P	K	E	L	V	A	R	V	R	A
Template Known Secondary structure		S	S								T	T								.	.	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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