Job Description P03960 Confidence 97.78% Date Thu Jan 5 10:58:08 GMT 2012 Rank 76 Aligned Residues 88 % Identity 34% Template c3mpoD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	T	I	D	A	V	Q	A	A	K	A	Q	G	I	K	V	V	L	C	T	G	R	P	L	T	G	V	Q	P	Y	L	D	A	X	D	I	D	G	D	D	Q	Y	A	I	T	F	N	G	S	V	A	Q	T	I	S	G	K	V	L	T	N	H	S	L	T	Y	E	D	Y	I	D	L	E	A	W	A	R	K	V
Template Known Secondary structure			T	T										T	T								S	S		G	G	G	T							T	T			S	S	S						G	G	G	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	H	F	Q	I	E	T	P	D	Y	I	Y	T	A	N	K	D	I	S	A	Y	T	I	A	E	S	Y	L	V	R	X	L	I	Q	Y	R	E	V	S	E	T	P	R	D	L	T	I	S	K	A	X	F	V	D	Y	P	Q	V	I	E	Q	V	K	A	N	X	P	Q	D	F	K	D	R	F	S	V	V	Q	S
Template Known Secondary structure		T								S	S							S	S													T								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
									490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.					.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	L	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E	G	R	L	.	.	.	.	V	A	M	T	G	D	G	T	N	D	A	P	A	L	A	Q	A	D	V	A	V	A	M	N	S	G	T	Q	A	A	K	E
Query Conservation		.	.	.	.	.	.	.																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.							.	.	.															.	.	.	.						.	.	.
Template Conservation															.	.	.																								.	.	.
Template Sequence		A	P	Y	F	I	E	V	X	N	R	R	A	S	.	.	.	K	G	G	T	L	S	E	L	V	D	Q	L	G	L	T	A	D	D	V	X	T	L	G	.	.	.	N	D	L	T	X	I	K	Y	A	G	L	G	V	A	X	G	N	A	I	D	E	V	K	E
Template Known Secondary structure			T	T							T	T			.	.	.												T	T			G	G	G						.	.	.	T	T							S	T						T	T
Template Predicted Secondary structure															.	.	.																								.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions