Job Description P03960 Confidence 100.00% Date Thu Jan 5 10:58:08 GMT 2012 Rank 8 Aligned Residues 567 % Identity 27% Template c3j09A_ PDB info PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa Resolution 10.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	T	T	C	I	S	I	A	M	A	S	G	A	M	P	G	N	A	L	F	S	A	A	I	S	G	W	L	W	I	T	V	L	F	A	N	F	A	E	A	L	A	E	G	R	S	K	A	Q	A	N	S	L	K	G	V	K	K	T	A	F	A	R	K	L	R	E	P	K	Y	G	A	A	A	D	K	V	P
Query Conservation
Alig confidence																																																															.								.	.	.	.
Template Conservation																																																															.								.	.	.	.
Template Sequence		G	V	G	A	A	F	L	A	S	V	L	S	T	A	G	V	L	P	R	E	Y	S	F	Y	E	T	S	V	L	L	L	A	F	L	L	L	G	R	T	L	E	A	R	A	K	S	R	T	G	E	A	I	K	K	L	V	G	L	Q	A	K	.	T	A	V	V	I	R	D	.	.	.	.	G	K	E	I	A	V	P
Template Known Secondary structure																T	T	T	T							T	T																				T	T				T	T						T	S		S	.							T	.	.	.	.	T
Template Predicted Secondary structure																																																															.								.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.					.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Q	L	R	K	G	D	I	V	L	V	E	A	G	D	I	I	P	C	D	G	E	V	I	E	G	G	A	S	V	D	E	S	A	I	T	G	E	S	A	P	V	I	R	E	S	G	G	D	F	A	S	V	T	G	G	T	R	I	L	S	D	W	L	V	I	E	C	S	V	N	P	G	E	T	F	L	D	R
Query Conservation
Alig confidence																																																			.	.	.
Template Conservation																																																			.	.	.
Template Sequence		V	E	E	V	A	V	G	D	I	V	I	V	R	P	G	E	K	I	P	V	D	G	V	V	V	E	G	E	S	Y	V	D	E	S	M	I	S	G	E	P	V	P	V	L	K	S	K	G	D	.	.	.	E	V	F	G	A	T	I	N	N	T	G	V	L	K	I	R	A	T	R	V	G	G	E	T	L	L	A	Q
Template Known Secondary structure		G	G	G			T	T							T	T		B			S																				S	S						T	T		.	.	.				T	T					S	S										G	G	G	S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		M	I	A	M	V	E	G	A	Q	R	R	K	T	P	N	E	I	A	L	T	I	L	L	I	A	L	T	I	V	F	L	L	A	T	A	T	L	W	P	F	S	A	W	G	G	.	.	.	N	A	V	S	V	T	V	L	V	A	L	L	V	C	L	I	P	T	T	I	G	G	L	L	S	A	I	G	V	A	G	M
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		I	V	K	L	V	E	D	A	M	G	S	K	P	P	I	Q	R	L	A	D	K	V	V	A	Y	F	I	P	T	V	L	L	V	A	I	S	A	F	I	Y	W	Y	F	I	A	H	A	P	L	L	F	A	F	T	T	L	I	A	V	L	V	V	A	C	P	C	A	F	G	L	A	T	P	T	A	L	T	V	G	M
Template Known Secondary structure							S	S	S			S																												T	T	S		S	S	T	T		T	T			S												S		T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	M	L	G	A	N	V	I	A	T	S	G	R	A	V	E	A	A	G	D	V	D	V	L	L	L	D	K	T	G	T	I	T	L	G	N	R	Q	A	S	E	F	I	P	A	Q	G	V	D	E	K	T	L	A	D	A	A	Q	L	A	S	L	A	D	E	T	P	E	G	R	S	I	V	I	L	A	K	Q	R
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		G	K	G	A	E	L	G	I	L	I	K	N	A	D	A	L	E	V	A	E	K	V	T	A	V	I	F	D	K	T	G	T	L	T	K	G	K	P	E	V	T	D	L	V	P	L	N	G	.	D	E	R	E	L	L	R	L	A	A	I	A	E	R	R	S	E	H	P	I	A	E	A	I	V	K	K	A	L	E	H
Template Known Secondary structure						T	T	T				S	S	T	T					G	G	G												T	S		S										S	S	S	.														T	T			S													T
Template Predicted Secondary structure																																																		.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	R	E	R	D	V	Q	S	L	H	A	T	F	V	P	F	T	A	Q	S	R	M	S	G	I	N	I	D	N	R	M	I	R	K	G	S	V	D	A	I	R	R	H	V	E	A	N	G	G	H	F	P	T	D	V	D	Q	K	V	D	Q	V	A	R	Q	G	A	T	P	L	V	V	V	E	G	S	R	V
Query Conservation
Alig confidence													.	.	.												.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation													.	.	.												.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		G	I	E	L	G	E	P	E	K	V	E	.	.	.	V	I	A	G	E	G	V	V	A	D	G	.	.	.	.	.	.	.	.	I	L	V	G	N	K	R	L	M	E	D	F	G	V	A	.	.	.	.	V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	N	G	R	V
Template Known Secondary structure		T					S						.	.	.			T	T	T					T	T	.	.	.	.	.	.	.	.												T	T			.	.	.	.														T	T	T									T	T
Template Predicted Secondary structure													.	.	.												.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.	.	.	.									.	.	500	.	.	.	.	.	.	.	.	.	510	.	.					.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	I	A	L	K	D	I	V	K	G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	D	D	F	L	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E	G	R	L	V	A	M	T	G	D	G
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	M	G	I	K	V	G	M	I	T	G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	A	.	K	E	V	V	A	F	V	G	D	G
Template Known Secondary structure											S		T	T											T	T								S	S													T		S					S			T	T										T	T	.	T									S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.		610	.	.	.	.	.	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	D	A	P	A	L	A	Q	A	D	V	A	V	A	M	N	S	G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E	V	V	H	I	G	K	Q	M	L	M	T	R	G	S	L	T	T	F	S	I	A	N	D	V	A	K	Y	F	A	I	I	P	A	A	F	A	A	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	D	A	P	A	L	A	Q	A	D	L	G	I	A	V	G	S	G	S	D	V	A	V	E	S	G	D	I	V	L	I	R	D	D	L	R	D	V	V	A	A	I	Q	L	S	R	K	T	M	S	K	I	K	Q	N	I	F	W	A	L	I	Y	N	V	I	L	I	P	A	A	A	G	L	L	Y	P	I	F	G
Template Known Secondary structure		S	T	T							S	S									S			S	S			S	S				S	S			T	T																																					T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	L	N	A	L	N	I	M	C	L	H	S	P	D	S	A	I	L	S	A	V	I	F	N	A	L	I	I	V	F	L	I	P	L	A	L	K	G	V	S	Y	K	P	L	T	A	S
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	F	R	P	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	L	A	M	A	M	S	S	V	S	V	V	A	N	S	L	L	L	R	N	Y	V	P	P	I	R	R
Template Known Secondary structure			S						.	.	.	.	.	.	.	.	.	.	.	.	.							T									T	T	S					S		S	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		700	.	.	.	.	.	.														.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.