Job Description P03960 Confidence 96.84% Date Thu Jan 5 10:58:08 GMT 2012 Rank 100 Aligned Residues 121 % Identity 15% Template c3ib6B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b Resolution 2.20 Å

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		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.				.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.																.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	K	G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	.	.	.	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	D	D	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E
Query Conservation																										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	R	K	N	A	K	E	T	L	E	K	V	K	Q	L	G	F	K	Q	A	I	L	S	N	T	A	T	S	D	T	E	V	I	K	R	V	L	T	N	F	G	I	I	D	Y	F	D	F	I	Y	A	S	N	S	E	L	Q	P	G	K	M	E	K	P	D	K	T	I	F	D	F	T	L	N	A	L	Q	I	D
Template Known Secondary structure			B		T	T											T	T										S	S													T	T		G	G	G									T	T	S	S	S	S				T	T													T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.								.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																									.	.	.	.	.	.	.
Query SS confidence													.																									.	.	.	.	.	.	.
Query Sequence		G	R	L	V	A	M	T	G	D	G	T	.	N	D	A	P	A	L	A	Q	A	D	V	A	V	A	M	N	S	G	T	Q	A	A	K	E	.	.	.	.	.	.	.	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E	V	V	H	I	G	K	Q	M
Query Conservation													.																									.	.	.	.	.	.	.
Alig confidence													.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	E	A	V	M	V	G	N	T	F	E	S	D	I	I	G	A	N	R	A	G	I	H	A	I	W	L	Q	N	P	E	V	C	L	Q	D	E	R	L	P	L	V	A	P	P	F	V	I	P	V	W	D	L	A	D	V	P	E	A	L	L	L	L	K	K	I
Template Known Secondary structure		G	G	G						S	B	T	T	T	T							T	T									T	T	T		B		S	S						S	S	S						S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions