Job Description P03960 Confidence 21.99% Date Thu Jan 5 10:58:08 GMT 2012 Rank 407 Aligned Residues 114 % Identity 11% Template c3ed5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yfnb; PDBTitle: the crystal structure of yfnb from bacillus subtilis subsp. subtilis2 str. 168 Resolution 1.72 Å

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		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.												.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.			510	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		K	D	I	V	K	G	G	I	K	E	R	F	A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	.	.	.	.	.	.	.	.	.	.	.	D	D	F	L	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E	.	.	G	R	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																		.																										.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																		.
Template Sequence		G	H	Q	L	I	D	G	A	F	D	L	I	S	N	L	Q	.	Q	Q	F	D	L	Y	I	V	T	N	G	V	S	H	T	Q	Y	K	R	L	R	D	S	G	L	F	P	F	F	K	D	I	F	V	S	E	D	T	G	F	Q	K	P	X	K	E	Y	F	N	Y	V	F	E	R	I	P	Q	F	S	A	E	H	T
Template Known Secondary structure					B		T	T										.	T	T	S								S												T	T		G	G	G		S					G	G	G	T	T	S		T	T											T	S	T	T			G	G	G
Template Predicted Secondary structure																		.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.				.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		V	A	M	T	G	D	G	T	N	D	A	P	A	L	A	Q	A	D	V	A	V	A	M	.	.	.	N	S	G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E	V	V
Query Conservation																									.	.	.
Alig confidence																									.	.	.																.	.
Template Conservation																																											.	.
Template Sequence		L	I	I	G	D	S	L	T	A	D	I	K	G	G	Q	L	A	G	L	D	T	C	W	X	N	P	D	X	K	P	N	V	P	E	I	I	P	T	Y	E	I	.	.	R	K	L	E	E	L	Y	H	I	L
Template Known Secondary structure						S		T	T	T	T							T	T								T	T					T	T					S				.	.	S	S	G	G	G
Template Predicted Secondary structure																																											.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions