Job Description P03960 Confidence 99.43% Date Thu Jan 5 10:58:08 GMT 2012
Rank 34 Aligned Residues 115
% Identity 17% Template c3e8mD_
PDB info
PDB header: transferaseChain: D: PDB Molecule: acylneuraminate cytidylyltransferase;
PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily
Resolution 1.10 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
448 . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490 . . . . . . . . . 500 . . . . . . . .
. 510 . . . . . . . . . 520 . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
I V K G G I K E R F A Q L R K M G I K T V M I T G D N R L T A A A I A A E A G V D D F L A E A T P E A K L A L I R Q Y Q A .
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E G R L V A M T G D G T N D A
Query Conservation  
                                                                . . . .          
Alig confidence  
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Template Conservation  
                                                                      . .                                      
Template Sequence  
K F N T S D S A G I F W A H N K G I P V G I L T G E K T E I V R R R A E K L K V D Y L F Q .
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G V V D K L S A A E E L C N E L G I N L E Q V A Y I G D D L N D A
Template Known Secondary structure  
G G G T T S T T S . . S S T G G G S G G G
Template Predicted Secondary structure  
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Template SS confidence  
   
31 . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . .
. . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . .
 
   
524 . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
P A L A Q A D V A V A M N S G T Q A A K E A G N M V D L D S N P T K L I E V V H I
Query Conservation  
                                       
Alig confidence  
Template Conservation  
                                           
Template Sequence  
K L L K R V G I A G V P A S A P F Y I R R L S T I F L E K R G G E G V F R E F V E
Template Known Secondary structure  
T T S S T T S T T S S T T T T
Template Predicted Secondary structure  
Template SS confidence  
   
109 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]