Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence36.41%DateThu Jan 5 10:58:08 GMT 2012
Rank276Aligned Residues40
% Identity13%Templatec2vs1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450... ......460...... ...470.........480..
Predicted Secondary structure 





.


.



Query SS confidence 










.












.















Query Sequence  IALKDIVKGGI. KERFAQLRKMGIK. TVMITGDNRLTAAAIA
Query Conservation 
 
 
 

   .   
  
  


 .
 




   

  

Alig confidence 










.












.















Template Conservation   






 
        
    
  







 





 
Template Sequence  TVIVDPPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVK
Template Known Secondary structure 


TT
S


SS
Template Predicted Secondary structure 













Template SS confidence 









































   336...340.........350.........360.........370.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions