 |
Job Description | P03960 | Confidence | 96.93% | Date | Thu Jan 5 10:58:08 GMT 2012 |
Rank | 97 | Aligned Residues | 109 |
% Identity | 17% | Template | c2qltA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:(dl)-glycerol-3-phosphatase 1; |
PDBTitle: crystal structure of an isoform of dl-glycerol-3-phosphatase, rhr2p,2 from saccharomyces cerevisiae
|
Resolution | 1.60 Å |
|
 |
  |   |
448 | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | |
. | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
I | V | K | G | G | I | K | E | R | F | A | Q | L | R | K | M | G | . |
I | K | T | V | M | I | T | G | D | N | R | L | T | A | A | A | I | A | A | E | A | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | F | L | A | E | A | T | P | E | A | K | L | A | L | I | R | Q | Y | Q | A | . |
. |
. |
. |
. |
. |
. |
E |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
| . |
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|   | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | E | V | P | G | A | V | K | L | C | N | A | L | N | A | L | P | K | E | K | W | A | V | A | T | S | G | T | R | D | M | A | K | K | W | F | D | I | L | K | I | K | R | P | E | Y | F | I | T | A | N | D | V | K | Q | G | K | P | H | P | E | P | Y | L | K | G | R | N | G | L | G | F | P | I | N | E | Q | D | P | S |
Template Known Secondary structure |   |
 |  |
| T | T |  |  |  |  |  |  |  |  |  | T | S |
| G | G | G |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| S | S |  |  |
| G | G | G |
| S | S |
| T | T | S | S |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| S | S |
| G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
  |   |
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | |
|
|
. | . | . | . | . | . | |
. | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | L | V | A | M | T | G | D | G | T | N | D | A | P | A | L | A | Q | A | D | . |
. |
. |
V | A | V | A | M | N | . |
S | G | T | Q | A | A | K | E | A | G | N | M | V | D | L | D | S | N | P | T | K | L |
Query Conservation |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
| . | . | . |
|
|
|
|
|   | . |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
| . | . |   |   |
|   |
|
|
Template Sequence |   |
K | S | K | V | V | V | F | E | D | A | P | A | G | I | A | A | G | K | A | A | G | C | K | I | V | G | I | A | T | T | F | D | L | D | F | L | K | E | K | G | C | D | I | I | V | . |
. |
K | N | H | E | S | I |
Template Known Secondary structure |   |
G | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | S | S | S |
|  |  |  |  | T | T | S | S |
| S |  |  |  | . | . | S | S | G | G | G |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
. | . | . | 240 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|