Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence38.23%DateThu Jan 5 10:58:08 GMT 2012
Rank262Aligned Residues97
% Identity16%Templatec2nt3A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator homolog; PDBTitle: receiver domain from myxococcus xanthus social motility protein frzs2 (y102a mutant)
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   410.........420.........430..... ....440.........450.........460.........470......
Predicted Secondary structure 






.............














Query SS confidence 

























. . . . . . . . . . . . .








































Query Sequence  GHFPTDVDQKVDQVARQGATPLVVVE. . . . . . . . . . . . . GSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRL
Query Conservation                   
 
 
 

 .............    

 
 
 
 

      
  
  


 
 




   
Alig confidence 

























.............








































Template Conservation 

       
   
   
  
        
           

                            

  
    
Template Sequence  ESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVIIGNPDG
Template Known Secondary structure 
S
TT


S

SSB
STT
BSTTTTTS

GGG
Template Predicted Secondary structure 






























Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   477..480.........490.........500........
Predicted Secondary structure 







Query SS confidence 































Query Sequence  TAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
Query Conservation 

  

   

  
 

  

 
  

  

 
Alig confidence 
















..












Template Conservation       
   
   

 
..
     
   
  
Template Sequence  FAQHRKLKAHADEAVAK. . PVDADQLVERAGA
Template Known Secondary structure  TSSS

SS..S

Template Predicted Secondary structure 




..


Template SS confidence 































   8990.........100..... ....110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions