Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence64.02%DateThu Jan 5 10:58:08 GMT 2012
Rank187Aligned Residues83
% Identity11%Templatec2i6xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   446...450.........460.........470.........480......... 490.........500........
Predicted Secondary structure 

















.................


Query SS confidence 











































. . . . . . . . . . . . . . . . .


















Query Sequence  KDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDD. . . . . . . . . . . . . . . . . FLAEATPEAKLALIRQYQA
Query Conservation   
 

      
  
  


 
 




   

  

   

  .................
 

  

 
  

  

 
Alig confidence 















.


























.................


















Template Conservation             
  
 .                                               

              
Template Sequence  LEEISAEKFDYIDSLR. PDYRLFLLSNTNPYVLDLAXSPRFLPSGRTLDSFFDKVYASCQXGKYKPNEDIFLEXIADSGX
Template Known Secondary structure 
T.TTS


TSTTSSTT


GGGGSST

TTS

Template Predicted Secondary structure 






.

































Template SS confidence 















































































   84.....90......... 100.........110.........120.........130.........140.........150.........160..
 
   509510.........520.........
Predicted Secondary structure 






Query SS confidence 




















Query Sequence  EGRLVAMTGDGTNDAPALAQA
Query Conservation   
  
 




 





  
Alig confidence 




















Template Conservation   
   
 


   

  
  
Template Sequence  KPEETLFIDDGPANVATAERL
Template Known Secondary structure 
GGG
S
T
Template Predicted Secondary structure 



Template SS confidence 




















   163......170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions