Return to main results Retrieve Phyre Job Id

Job DescriptionP03960
Confidence96.55%DateThu Jan 5 10:58:08 GMT 2012
Rank107Aligned Residues115
% Identity17%Templatec2hoqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative had-hydrolase ph1655; PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   448.450.........460.........470.........480.........490.... .....500.........510......
Predicted Secondary structure 


















...........



Query SS confidence 














































. . . . . . . . . . .





















Query Sequence  IVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEA. . . . . . . . . . . TPEAKLALIRQYQAEGRLVAMT
Query Conservation   

      
  
  


 
 




   

  

   

  
 

 ........... 

 
  

  

  
  
 

Alig confidence 














































...........





















Template Conservation           
  
        
 
                                

                     
Template Sequence  REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV
Template Known Secondary structure 
B
TTT

S
TT
GGG
SGGGGT

TT
T

GGG
Template Predicted Secondary structure 




































Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   517..520 .........530 .........540. ........550.........560....
Predicted Secondary structure 


.

...

...




Query SS confidence 



.









. . .










. . .






















Query Sequence  GDGT. NDAPALAQAD. . . VAVAMNSGTQA. . . AKEAGNMVDLDSNPTKLIEVVHI
Query Conservation 


 .





  

...




  

  ...
  





       
   
  
Alig confidence 



.









...










...








..











Template Conservation   

   

  
  

   
 
                
  
..  
 

   
  
Template Sequence  GDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI. . DNLESLLEVLAR
Template Known Secondary structure  S
TTTTTT


S


TTGGG
S..SSTT
Template Predicted Secondary structure 















..

Template SS confidence 






















































   174.....180.........190.........200.........210.... .....220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions