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Job DescriptionP03960
Confidence96.35%DateThu Jan 5 10:58:08 GMT 2012
Rank109Aligned Residues110
% Identity20%Templatec2cftA_
PDB info PDB header:phosphataseChain: A: PDB Molecule:pyridoxal phosphate phosphatase; PDBTitle: crystal structure of human pyridoxal 5'-phosphate2 phosphatase with its substrate
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   451........460.........470.........480.........490
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Query Sequence  GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDGAVFVLGGEGLR
Template Known Secondary structure  TTTT



S

TT

S

GGG

S

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S
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   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                             
                                    
Template Sequence  AELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAA
Template Known Secondary structure  TT

BTTS

STT







TT

TSTTSS




TTS

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   120.........130.........140.........150.........160.........170.........180.........190.........
 
   491........500.........510.........520 .........530 .........540.....
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Query Sequence  . . . . . . . . . . . LAEATPEAKLALIRQYQAEGRLVAMTGDGT. NDAPALAQAD. . . VAVAMNSGTQAAKEA. . . . . . . . . .
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Template Sequence  VETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLV
Template Known Secondary structure  T



STTSTT



GGGS
TTTT
SSSS

TT
GGGS
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   200.........210.........220.........230.........240.........250.........260.........270.........
 
   546...550.........560..
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Query Sequence  GNMVDLDSNPTKLIEVV
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Template Sequence  PHYYV. . ESIADLTEGL
Template Known Secondary structure 
S..SSGGGGGGG
Template Predicted Secondary structure 

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   280.... .....290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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