Job Description P03960 Confidence 100.00% Date Thu Jan 5 10:58:08 GMT 2012 Rank 10 Aligned Residues 239 % Identity 31% Template c2b8eB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:cation-transporting atpase; PDBTitle: copa atp binding domain Resolution 2.30 Å

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		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	V	D	V	L	L	L	D	K	T	G	T	I	T	L	G	N	R	Q	A	S	E	F	I	P	A	Q	G	V	D	E	K	T	L	A	D	A	A	Q	L	A	S	L	A	D	E	T	P	E	G	R	S	I	V	I	L	A	K	Q	R	F	N	L	R	E	R	D	V	Q	S	L	H	A	T	F	V	P	F
Query Conservation
Alig confidence																															.																																																		.
Template Conservation																															.																																																		.
Template Sequence		A	E	K	V	T	A	V	I	F	D	K	T	G	T	L	T	K	G	K	P	E	V	T	D	L	V	P	L	N	.	G	D	E	R	E	L	L	R	L	A	A	I	A	E	R	R	S	E	H	P	I	A	E	A	I	V	K	K	A	L	E	H	G	I	E	L	G	E	P	E	K	V	E	V	I	A	G	E	G	.
Template Known Secondary structure												T					B		S										S	S	.	S														T	T			S													T	T							S	S					T	T	T		.
Template Predicted Secondary structure																															.																																																		.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	Q	S	R	M	S	G	I	N	I	D	N	R	M	I	R	K	G	S	V	D	A	I	R	R	H	V	E	A	N	G	G	H	F	P	T	D	V	D	Q	K	V	D	Q	V	A	R	Q	G	A	T	P	L	V	V	V	E	G	S	R	V	L	G	V	I	A	L	K	D	I	V	K	G	G	I	K	E	R	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	V	A	D	G	I	L	V	G	N	K	R	L	X	E	D	F	G	V	.	.	.	.	A	V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	N	G	R	V	E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.				T	T												T	T		.	.	.	.																T	T									T	T												B		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
												493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.					.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	R	K	M	G	I	K	T	V	M	I	T	G	D	N	R	L	T	A	A	A	I	A	A	E	A	G	V	D	D	F	L	A	E	A	T	P	E	A	K	L	A	L	I	R	Q	Y	Q	A	E	G	R	L	V	A	M	T	G	D	G	T	N	D	A	P	A	L	A	Q	A	D	V	A	V	A	M	N	S
Query Conservation
Alig confidence																																																					.																											.	.
Template Conservation																																																					.																											.	.
Template Sequence		Q	E	L	K	R	X	G	I	K	V	G	X	I	T	G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	A	.	K	E	V	V	A	F	V	G	D	G	I	N	D	A	P	A	L	A	Q	A	D	L	G	I	A	V	.	.
Template Known Secondary structure							T	T								S	S												T	T		S					S			T	T										T	T	.	T	S								S	S	T	T							S	S						.	.
Template Predicted Secondary structure																																																					.																											.	.
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	Q	A	A	K	E	A	G	N	M	V	D	L	D	S	N	P	T	K	L	I	E	V	V	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	D	I	V	L	I	R	D	D	L	R	D	V	V	A	A	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.						S	S			T								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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