Job Description P02358 Confidence 2.19% Date Thu Jan 5 10:57:29 GMT 2012 Rank 77 Aligned Residues 80 % Identity 8% Template c3ns5B_ PDB info PDB header:translation Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b; PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161 Resolution 2.60 Å

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		6	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.
Predicted Secondary structure								.																																																																	.	.
Query SS confidence								.																																																																	.	.
Query Sequence		I	V	F	M	V	H	.	P	D	Q	S	E	Q	V	P	G	M	I	E	R	Y	T	A	A	I	T	G	A	E	G	K	I	H	R	L	E	D	W	G	R	R	Q	L	A	Y	P	I	N	K	L	H	K	A	H	Y	V	L	M	N	V	E	A	P	Q	E	V	I	D	E	L	E	.	.	T	T	F	R	F	N	D
Query Conservation								.																																																																	.	.
Alig confidence								.																														.	.	.	.	.	.																														.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		Y	I	V	V	N	G	A	P	V	I	P	S	A	K	V	P	V	L	K	K	A	L	T	S	L	F	S	K	A	G	K	V	V	N	M	E	.	.	.	.	.	.	F	P	I	D	E	A	T	G	K	T	K	G	F	L	F	V	E	C	G	S	M	N	D	A	K	K	I	I	K	S	F	H	G	K	R	L	D	L
Template Known Secondary structure							S					B	G	G	G													T	T	T	S							.	.	.	.	.	.					T	T	T	T				S							S	S												T	T		B	S	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		83		.	.	.	.	.	.	90	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	V	I	R	S	M	V	M	R
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		K	H	R	L	F	L	Y	T	M	K
Template Known Secondary structure		S		B
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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