Job Description P02358 Confidence 100.00% Date Thu Jan 5 10:57:29 GMT 2012 Rank 6 Aligned Residues 95 % Identity 25% Template c3bbnF_ PDB info PDB header:ribosome Chain: F: PDB Molecule:ribosomal protein s6; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																	.																																							.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																							.	.	.	.	.	.	.	.	.
Query Sequence		M	R	H	Y	E	I	V	F	M	V	H	P	D	Q	S	.	E	Q	V	P	G	M	I	E	R	Y	T	A	A	I	T	G	A	E	G	K	I	H	R	L	E	D	W	G	R	R	Q	L	A	Y	P	I	N	K	.	.	.	.	.	.	.	.	.	L	H	K	A	H	Y	V	L	M	N	V	E	A	P	Q	E	V
Query Conservation																	.																																							.	.	.	.	.	.	.	.	.
Alig confidence																	.																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	Q	Y	E	T	M	A	V	L	R	P	D	M	T	E	D	E	R	L	T	L	T	Q	K	Y	E	E	L	L	V	A	G	G	A	M	Y	V	E	V	F	N	R	G	V	I	P	L	A	Y	S	I	K	R	K	N	K	A	G	E	T	N	N	Y	L	D	G	I	Y	L	L	F	T	Y	F	T	K	P	E	S
Template Known Secondary structure													T	T	S							S	T	T								T	T	T	S															S	S		T	T	S		S	S	S		S	S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	E	L	E	T	T	F	R	F	N	D	A	V	I	R	S	M	V	M	R	T	K	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	P	L	E	A	A	L	V	T	D	D	D	V	I	R	S	S	S	F	K	I	R	K	R
Template Known Secondary structure		S									T	S	S			S						B			S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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