Job Description P02358 Confidence 3.00% Date Thu Jan 5 10:57:29 GMT 2012 Rank 58 Aligned Residues 60 % Identity 17% Template c1y9jA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sec1 family domain containing protein 1; PDBTitle: solution structure of the rat sly1 n-terminal domain Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	H	Y	E	I	V	F	M	V	H	P	D	Q	S	E	Q	V	P	G	M	I	E	R	Y	T	A	A	I	T	G	A	E	G	K	I	H	R	L	E	D	W	G	R	R	Q	L	A	Y	P	I	N	K	L	H	K	A	H	Y	V	L	M	N	V	E	A	P	Q	E	V	I	D	E	L	E	T	T	F	R	F
Query Conservation
Alig confidence															.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	D	V	P	A	V	Y	F	V	M	P	T	.	E	E	N	I	D	R	L	C	Q	D	L	R	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	E	S	Y	Y	L	N	F	I	S	A	I	S	R	S	K	L	E	D	I	A	N	A	A	L	A
Template Known Secondary structure		B	T	T	S										.														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	S							S	S																T
Template Predicted Secondary structure															.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.																										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		81	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	A	V	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	A	V	T	Q
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions