Return to main results Retrieve Phyre Job Id

Job DescriptionP19767
Confidence88.35%DateThu Jan 5 11:37:29 GMT 2012
Rank178Aligned Residues44
% Identity14%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60. ........70.........80.........90
Predicted Secondary structure 


..







Query SS confidence 














. .




























Query Sequence  ASQPGKHQKIIDMAM. . NGVGCRASARIMGVGLNTVLRHLKNSGRS
Query Conservation           
     ..

 


 


   

  

 
 

     
Alig confidence 














..




























Template Conservation   

     


  
         


  
 

 



  
  
   
Template Sequence  KITDTDVAVLLKXVEIEKPITSEELADIFKLSKTTVENSLKKLIEL
Template Known Secondary structure  T


S
T

T
Template Predicted Secondary structure 












Template SS confidence 













































   18.20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions