Job Description P19767 Confidence 97.61% Date Thu Jan 5 11:37:29 GMT 2012 Rank 6 Aligned Residues 51 % Identity 18% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	T	W	Q	L	Q	F	T	Y	T	A	S	Q	P	G	K	H	Q	K	I	I	D	M	A	M	N	G	V	G	C	R	A	S	A	R	I	M	G	V	G	L	N	T	V	L	R	H	L	K	N	S	G	R
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		G	G	V	F	V	N	.	.	.	G	R	P	L	P	D	S	T	R	Q	R	I	V	E	L	A	H	S	G	A	R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K	I	L	G	R	Y	Y	A
Template Known Secondary structure		S					T	.	.	.	T	S																T	T											T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		9	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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