|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
. | . | . | . | . | . | 40 | . | . | . | . | |
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | Q | L | L | A | S | P | S | L | Q | L | V | T | Y | P | A | S | A | T | A | Q | S | A | E | F | A | S | A | D | C | V | T | . |
. |
G | L | N | E | I | G | Q | I | S | V | S | . |
. |
. |
N | I | S | G | D | P | Q | D | V | E | R | I | V | A | L | K | A | D | E | Q | G | A | S | W | Y | R | I | I | T | M | Y |
Query Conservation |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|   |
|
|   |   |   |
|
|   | . | . |   |
|   |   |   |
|   |
|
|
|
| . | . | . |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |   |
|
|   |
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |
|   |   | . | . |   |
|
|   |   |
|
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
Template Sequence |   |
M | K | K | R | I | I | A | A | A | L | . |
. |
L | A | T | V | A | S | F | S | T | L | A | A | E | Q | V | S | K | Q | E | I | S | H | F | K | L | V | K | V | G | T | I | N | V | S | Q | S | G | G | Q | I | S | S | P | S | D | L | R | E | K | L | S | E | L | A | D | A | K | G | G | K | Y | Y | H | I | I | A | A | R |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| S |
|
|
|
|
|  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | |
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | Q | Q | P | D | N | W | R | V | Q | A | I | L | Y |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   | . | . |   |   |   |   |
|
|   |
|
|
Template Sequence |   |
E | H | G | P | . |
. |
N | F | E | A | V | A | E | V | Y |
Template Known Secondary structure |   |
 |  | T | T | . | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | |
|
. | . | . | . | . | . | . | 90 | . |
  |