Return to main results Retrieve Phyre Job Id

Job DescriptionP65292
Confidence2.65%DateThu Jan 5 12:10:10 GMT 2012
Rank63Aligned Residues12
% Identity25%Templatec2aivA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:fragment of nucleoporin nup116/nsp116; PDBTitle: multiple conformations in the ligand-binding site of the2 yeast nuclear pore targeting domain of nup116p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50...
Predicted Secondary structure 






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Query Sequence  QTDNDTGMISYK
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Template Conservation 


  

 
 
 
Template Sequence  SYDADSGTYVFI
Template Known Secondary structure 
TTT

Template Predicted Secondary structure 



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   130.........140.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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