Job Description Q47536 Confidence 95.38% Date Thu Jan 5 12:36:49 GMT 2012 Rank 19 Aligned Residues 188 % Identity 13% Template d1vh3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.70

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		C	I	D	A	I	I	P	A	Y	N	E	G	P	C	L	A	Q	S	L	D	N	L	L	R	N	P	Y	F	C	R	V	I	C	V	N	D	G	S	T	D	N	T	E	A	V	M	A	E	V	K	R	K	W	G	D	R	F	V	A	V	T	Q	K	N	T	G	K	G	G	A	L	M	N	G	L	N	Y	A	T	.
Query Conservation																																																																																	.
Alig confidence								.	.	.																		.											.	.	.	.	.	.																																					.
Template Conservation								.	.	.																		.											.	.	.	.	.	.
Template Sequence		S	F	T	V	I	I	.	.	.	P	A	R	P	X	I	Q	H	V	F	E	K	A	L	Q	S	G	.	A	S	R	V	I	I	A	T	D	N	.	.	.	.	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	X	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I
Template Known Secondary structure								.	.	.																T	T	.		S							S		.	.	.	.	.	.										T	T								S			S	S												T	T
Template Predicted Secondary structure								.	.	.																		.											.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	C	D	Q	V	F	L	S	D	A	D	T	Y	V	P	P	D	Q	D	G	M	G	Y	M	L	A	E	I	E	R	G	A	D	A	V	G	G	I	P	S	T	A	L	K	G	A	G	L	L	P	H	I	R	A	T	V	K	L	P	M	I	V	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	N	E	I	I	V	N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	X	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	X
Template Known Secondary structure			T	T	S							T	T		S																	T	T		S															T		T	T	S							T	T	S	B						S	S		S	S							T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
				173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																												.	.
Query SS confidence		.	.																																												.	.
Query Sequence		.	.	R	T	L	Q	Q	L	L	G	G	A	P	F	I	I	S	G	A	C	G	M	F	R	T	D	V	L	R	K	F	G	F	S	D	R	T	K	V	E	D	L	D	L	T	.	.	W	T	L	V	A	N	G	Y	R	I	R	Q	A
Query Conservation		.	.																																												.	.
Alig confidence		.	.																																												.	.
Template Conservation
Template Sequence		N	L	Q	D	V	Q	K	V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	A	P	T	Q	L	E	N	L	E	K	L	E	Q	L	R	V	L	Y	N	G	E	R	I	H	V	E
Template Known Secondary structure		T				T	T	T					S																						S										T		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions