Job Description Q47536 Confidence 83.89% Date Thu Jan 5 12:36:49 GMT 2012 Rank 27 Aligned Residues 208 % Identity 11% Template d1lvwa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 1.70

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	P	A	Y	N	E	G	P	C	L	A	Q	S	L	D	N	L	L	R	N	P	Y	F	C	R	V	I	C	V	N	D	G	S	T	D	N	T	E	A	V	M	A	E	V	K	R	K	W	G	D	R	F	V	A	V	T	Q	K	N	T	G	K	G	G	A	L	M	N	G	L	N	Y	A	T	C	D	Q	V	F
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	L	P	I	Y	D	K	.	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	R	D	L	P	L	Y	R	D	L	L	G	D	G	S	Q	F	G	V	R	F	S	Y	R	V	Q	E	E	P	R	G	I	A	D	A	F	I	V	G	K	D	F	I	G	D	S	K	V	A
Template Known Secondary structure		G	S			T	T		.		T	T										T	T										T	T	T									T	T	S	G	G	G	T	S								S	S				G	G	G					T					T	T	S
Template Predicted Secondary structure									.
Template SS confidence
		25	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	A	D	T	Y	V	P	P	D	Q	D	G	M	G	Y	M	L	A	E	I	E	R	G	A	D	A	V	G	G	I	P	S	T	A	L	K	G	A	G	L	L	P	H	I	R	A	T	V	K	L	P	M	I	V	M	K	R	T	L	Q	Q	L	L	G	G	A	P	F	I	I	S	G	A	C	G	M	F	R
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		L	V	L	G	D	N	V	F	Y	G	H	R	F	S	E	I	L	R	R	A	A	S	L	E	D	G	A	V	I	F	G	Y	Y	V	R	D	P	R	P	F	G	V	V	E	F	D	S	E	G	R	V	I	S	I	E	E	K	P	S	R	P	K	S	N	Y	V	V	P	G	L	Y	F	Y	D	N	Q	V	V	.	.
Template Known Secondary structure					T	T						T	T										T			S	S									S			T	T	S							T	T	S	B							S		S	S		S		S					S						T	T			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	V	L	R	K	F	G	F	S	D	R	T	K	V	E	D	L	D	L	T	W	T	L	V	A	N	G	Y	R	I	R	Q	A	N	R	C	I	V	Y	P	Q	E	C	N	S	P	R	E	E	W	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	I	A	R	R	I	E	P	S	D	R	G	E	L	E	I	T	S	V	N	E	E	Y	L	R	M	G	K	L	R	V	E	L	M	G	R	G	M	A	W	L	D	T	G	T	H	D	G	L	L	E
Template Known Secondary structure		.										T	T	S														T	T									T	T							S	S
Template Predicted Secondary structure		.
Template SS confidence
			182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions