Job Description Q47536 Confidence 82.68% Date Thu Jan 5 12:36:49 GMT 2012 Rank 30 Aligned Residues 213 % Identity 13% Template c3tqdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii Resolution 1.80 Å

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		32	.	.	.	.	.	.	.	40	.	.	.												.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	A	I	I	P	A	Y	N	E	G	P	.	.	.	.	.	.	.	.	.	.	.	C	L	A	Q	S	L	D	N	L	L	R	N	P	Y	F	C	R	V	I	C	V	N	D	G	S	T	D	N	T	E	A	V	M	A	E	V	K	R	K	W	G	D	R	F	V	A	V	T	Q	K	N	T	G	K	G	G	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.														.											.	.	.	.	.	.
Template Conservation																																						.											.	.	.	.	.	.
Template Sequence		F	R	V	I	I	P	A	R	F	D	L	P	G	K	A	L	V	D	I	A	G	K	P	X	I	Q	H	V	Y	E	S	A	I	K	S	G	.	A	E	E	V	V	I	A	T	D	D	.	.	.	.	.	.	K	R	I	R	Q	V	A	E	D	F	G	A	V	V	C	X	T	S	S	D	H	Q	S	G	T	E	R
Template Known Secondary structure													T	T	G	G	G				T	T														T	T	.		S							S		.	.	.	.	.	.										T	T								T	T			S
Template Predicted Secondary structure																																						.											.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.														.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure														.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	N	G	L	N	Y	A	T	C	D	Q	.	.	.	V	F	L	S	D	A	D	T	Y	V	P	P	D	Q	D	G	M	G	Y	M	L	A	E	I	E	R	G	A	D	A	V	G	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	L	K	G	A	G	L	L	P	H	I	R	A	T	V
Query Conservation														.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	E	A	A	V	A	L	G	F	E	D	D	E	I	I	V	C	L	Q	G	D	E	P	L	I	P	P	D	A	I	R	K	L	A	E	D	L	D	E	H	D	K	V	A	S	L	C	T	P	I	T	E	V	D	E	L	F	N	P	H	S	T	K	V	V	L	N	R	R	N	Y	A	L	Y	F	S	H	A	P
Template Known Secondary structure									T	T			T	T								T	T																																				T		T	T	S							T	T	S	B						S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		K	L	P	M	I	V	M	K	R	T	L	Q	Q	L	L	G	G	A	P	F	I	I	S	G	A	C	G	M	F	R	T	D	V	L	R	K	F	G	F	S	D	R	T	K	V	E	D	L	D	L	T	.	.	W	T	L	V	A	N	G	Y	R	I	R	Q	A	N	R	C	I	V	Y	P	Q	E	C	N	S	P	R
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		I	P	W	G	R	D	T	F	S	D	K	E	N	L	Q	L	N	G	S	H	Y	R	H	V	G	I	Y	A	Y	R	V	G	F	L	E	E	Y	L	S	W	D	A	C	P	A	E	K	X	E	A	L	E	Q	L	R	I	L	W	H	G	G	R	I	H	X	V	V	A	K	S	K	C	P	P	G	V	D	T	E	E
Template Known Secondary structure		S	S			T	T	T	T	T		G	G	G				S	S																						S										T		T	T						T	T									S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		243	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	W	R	R	W	R	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	E	R	V	R	A	Y	F
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions