Job Description Q47536 Confidence 99.95% Date Thu Jan 5 12:36:49 GMT 2012 Rank 5 Aligned Residues 224 % Identity 19% Template c2z86D_ PDB info PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp Resolution 2.40 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																		.			.
Query SS confidence																																		.			.
Query Sequence		K	P	S	Q	K	K	G	C	I	D	A	I	I	P	A	Y	N	E	G	P	C	L	A	Q	S	L	D	N	L	L	R	N	.	P	Y	.	F	C	R	V	I	C	V	N	D	G	S	T	D	N	T	E	A	V	M	A	E	V	K	R	K	W	G	D	R	F	V	A	V	T	Q	K	N	T	G	K	G	G	A	L
Query Conservation																																		.			.
Alig confidence																																		.			.
Template Conservation
Template Sequence		R	K	E	L	I	I	D	G	L	S	I	V	I	P	T	Y	N	R	A	K	I	L	A	I	T	L	A	C	L	C	N	Q	K	T	I	Y	D	Y	E	V	I	V	A	D	D	G	S	K	E	N	I	E	E	I	V	R	E	F	E	S	L	L	N	I	K	Y	V	R	Q	K	D	Y	G	Y	Q	L	C	A	V	R
Template Known Secondary structure																		S														T				S	S										S		S	S									T	T	T	T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	L	N	Y	A	T	C	D	Q	V	F	L	S	D	A	D	T	Y	V	P	P	D	Q	D	G	M	G	Y	M	L	A	E	I	E	R	G	A	D	A	V	G	G	I	P	S	T	A	L	K	G	A	G	L	L	P	H	I	R	A	T	V	K	L	P	M	I	V	M	K	R	T	L	Q	Q	L	L	G	G
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		N	L	G	L	R	A	A	K	Y	N	Y	V	A	I	L	D	C	D	M	A	P	N	P	L	.	W	V	Q	S	Y	M	E	L	L	A	V	D	D	N	V	A	L	I	G	P	R	K	Y	I	D	T	S	K	H	T	Y	L	D	F	L	S	Q	K	S	L	I	N	E	I	P	E	I	I	T	N	N	Q	V	A	G
Template Known Secondary structure										S	S							T	T					T	T	.													T	T										B			T	T										T	T	G	G	G	T	S		B							S	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		182	.	.	.																												.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		A	P	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	G	A	C	G	M	F	R	T	D	V	L	R	K	F	G	F	S	D	R	T	K	.	.	.	V	E	D	L	D	L	T	W	T	L	V	A	N	G	Y	R	I	R	Q	A	N	R	C
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		K	V	E	Q	N	K	S	V	D	W	R	I	E	H	F	K	N	T	D	N	L	R	L	C	N	T	P	F	R	F	F	S	G	G	N	V	A	F	A	K	K	W	L	F	R	A	G	W	F	D	E	E	F	T	H	W	G	G	E	D	N	E	F	G	Y	R	L	Y	R	E	G	C	Y	F	R	S	V	E	G	A
Template Known Secondary structure																		T	T	T	T	T	T	T		S		G	G	G	G			T	T						G	G	G									T	T		S	S	S														T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Y	P	Q	E	C	N	S	P	R	E	E	W	R	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	Y	H	Q	E	P	P	G	T	V	Q	L	L	Q	Q	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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