Return to main results Retrieve Phyre Job Id

Job DescriptionQ47536
Confidence82.76%DateThu Jan 5 12:36:49 GMT 2012
Rank29Aligned Residues221
% Identity12%Templatec2pa4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of udp-glucose pyrophosphorylase from corynebacteria2 glutamicum in complex with magnesium and udp-glucose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 



























...............
Query SS confidence 
































































. . . . . . . . . . . . . . .
Query Sequence  STLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKW. . . . . . . . . . . . . . .
Query Conservation        
    
 





  

   
   
 

  
 

 






 


 
  
        ...............
Alig confidence 















.....
















.

























...............
Template Conservation 

 
 
   

 



..... 
 


   
  
   
.
  
 

       
   
                      
Template Sequence  RFLPATKTVPKELLPV. . . . . VDTPGIELIAAEAAELG. ATRLAIITAPNKAGVLAHFERSSELEETLMERGKTDQVEII
Template Known Secondary structure  GGTTGGGTS
GGG
.....TTTT.


TT
TTTS

TTT
T
Template Predicted Secondary structure 









.....



.

















Template SS confidence 















































































   25....30.........40 .........50....... ..60.........70.........80.........90........
 
   84.....90.........100.........110.. .......120.........130.........140.........150.....
Predicted Secondary structure  ......











..


























Query SS confidence  . . . . . .




























. .










































Query Sequence  . . . . . . GDRFVAVTQKNTGKGGALMNGLNYATCDQ. . VFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAG
Query Conservation  ......                             ..      
                        
           
Alig confidence  ......




























..










































Template Conservation               
    

  

  
   
        

  
                                    
Template Sequence  RRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGGSVLCAVEVSEADVSK
Template Known Secondary structure  TS
SS


TTGGGS
TT


TTSSS

S

TTTGGG
Template Predicted Secondary structure 
































Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170........
 
   156...160..... ....170.........180.........190..... ....200.........210.........220........
Predicted Secondary structure 

.....














..













Query SS confidence 









. . . . .





























. .
































Query Sequence  LLPHIRATVK. . . . . LPMIVMKRTLQQLLGGAPFIISGACGMFRT. . DVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQA
Query Conservation            .....                      
     
 ..      
       

 

  

   
  
   
Alig confidence 









.....





























..
































Template Conservation 

               
    


        
   


     

  
         
    
 
  
   
  
   
Template Sequence  YGIFEIEADTKDSDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEGHPVHIV
Template Known Secondary structure  S

SSTTS

GGG
S
STT



GGG


TT

Template Predicted Secondary structure 































Template SS confidence 















































































   179180.........190.........200.........210.........220.........230.........240.........250........
 
   229230.........240......
Predicted Secondary structure 








Query SS confidence 

















Query Sequence  NRCIVYPQECNSPREEWR
Query Conservation 
 
 
      
      
Alig confidence 







.








Template Conservation     
 
 
.


   
  
Template Sequence  IHQGKRHD. LGNPGGYIP
Template Known Secondary structure 

S
.TTS
Template Predicted Secondary structure 

.


Template SS confidence 

















   259260...... ...270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions