 |
Job Description | Q47536 | Confidence | 38.63% | Date | Thu Jan 5 12:36:49 GMT 2012 |
Rank | 60 | Aligned Residues | 115 |
% Identity | 14% | Template | c2e3dB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; |
PDBTitle: crystal structure of e. coli glucose-1-phosphate2 uridylyltransferase
|
Resolution | 1.95 Å |
|
 |
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | P | A | Y | N | E | G | P | C | L | A | Q | S | L | D | N | L | L | R | N | P | Y | F | C | R | V | I | C | V | N | D | G | S | T | D | N | T | E | A | V | M | A | E | V | K | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | W | G | D | R | F | V | A | V | T | Q | K | N | T | G | K |
Query Conservation |   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
| . |
|
|
|   |   |   |
|   |   |
|   |   |   |
| . |
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
M | L | P | L | V | D | K | . |
P | L | I | Q | Y | V | V | N | E | C | I | A | A | G | . |
I | T | E | I | V | L | V | T | H | S | S | K | N | S | I | E | N | H | F | D | T | S | F | E | L | E | A | M | L | E | K | R | Q | L | L | D | E | V | Q | S | I | C | P | P | H | V | T | I | M | Q | V | R | Q | G | K | G | L |
Template Known Secondary structure |   |
G |
|  |  | T | T |  | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | S | S |
| T | T |
|  |  |  |  |  |  |
|
|
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | A | L | M | N | G | L | N | Y | A | T | C | D | Q | V | F | L | S | D | A | D | T | Y | V | P | P | D | . |
. |
. |
. |
. |
Q | D | G | M | G | Y | M | L | A | E | I | E | R | G | A | D | A | V | G | G | I | P | S | T | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | H | A | V | L | C | A | H | P | V | V | G | D | E | P | V | A | V | I | L | P | D | V | I | L | D | E | Y | E | S | D | L | S | Q | D | N | L | A | E | M | I | R | R | F | D | E | T | G | H | S | Q | I | M | V | E | P | V | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |
| T | T |  |  |  |
| T | T | T | S |
| T | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|