Job Description Q47536 Confidence 99.96% Date Thu Jan 5 12:36:49 GMT 2012 Rank 2 Aligned Residues 220 % Identity 15% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.			60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																										.																	.		.	.															.
Query SS confidence																										.																	.		.	.															.
Query Sequence		S	T	L	R	R	K	P	S	Q	K	K	G	C	I	D	A	I	I	P	A	Y	N	E	G	.	P	C	L	A	Q	S	L	D	N	L	L	R	N	P	Y	F	.	C	.	.	R	V	I	C	V	N	D	G	S	T	D	N	T	E	.	A	V	M	A	E	V	K	R	K	W	G	D	R	F	V	A	V	T	Q	K
Query Conservation																										.																	.		.	.															.
Alig confidence																										.																	.		.	.															.
Template Conservation
Template Sequence		N	C	N	S	K	R	Y	L	E	T	L	P	N	T	S	I	I	I	P	F	H	N	E	G	W	S	S	L	L	R	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P	L	E	D	Y	M	A	L	F	P	S	V	R	I	L	R	T	K	K
Template Known Secondary structure		G	G	G	T					S	S											S	S																	S		G	G	G										S				G	G	G	T								T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	G	K	G	G	A	L	M	N	G	L	N	Y	A	T	C	D	Q	V	F	L	S	D	A	D	T	Y	V	P	P	D	Q	D	G	M	G	Y	M	L	A	E	I	E	R	G	A	D	A	V	G	G	I	P	S	T	A	L	K	G	A	G	L	L	P	H	I	R	A	T	V	K	L	P	M	I	V	M	K	R
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		R	E	G	L	I	R	T	R	M	L	G	A	S	V	A	T	G	D	V	I	T	F	L	D	S	H	C	E	A	N	V	N	.	.	W	L	P	P	L	L	D	R	I	A	R	N	R	K	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F	R	Y	E	T	Q	A	G	D	A	M	R	G	A	F	D	W	E
Template Known Secondary structure																		S	S							S	S					T	T	.	.		S											T	T												T	T	T							T	T	S	S							T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		174	.	.	.	.	.	180															.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		T	L	Q	Q	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	P	F	I	I	S	G	A	C	G	M	F	R	T	D	V	L	R	K	F	G	F	S	D	R	T	K	.	.	.	V	E	D	L	D	L	T	W	T	L	V	A	N	G	Y	R	I	R	Q	A	N	R	C	I	V	Y	P	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation
Template Sequence		M	Y	Y	K	R	I	P	I	P	P	E	L	Q	K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M	C	G	G	R	M	E	D	I	P	C	S	R	V	G	H	I
Template Known Secondary structure											T	T	T			S	S	T	T	S					S	S			S	S	S											T	T	S	S		T	T			S	S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		237	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	K	Y
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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