Job Description Q9S4W2 Confidence 86.88% Date Thu Jan 5 12:38:17 GMT 2012 Rank 59 Aligned Residues 54 % Identity 26% Template c3pxpA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:helix-turn-helix domain protein; PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																								.	.
Query SS confidence																			.	.	.	.	.	.	.																								.	.
Query Sequence		D	M	H	P	A	E	Q	I	A	G	F	R	A	M	A	Q	E	.	.	.	.	.	.	.	G	K	T	P	A	Q	I	G	D	L	L	G	Y	S	P	R	H	V	Q	R	M	L	K	.	.	L	A	D	L	A	P	V	I	L	D	A	L	A	E
Query Conservation																			.	.	.	.	.	.	.																								.	.
Alig confidence																			.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		G	X	E	R	A	A	F	G	K	L	V	Q	A	L	R	R	E	H	R	D	E	K	G	R	V	W	T	Q	E	V	L	A	E	R	T	Q	L	P	K	R	T	I	E	R	I	E	N	G	S	L	A	H	L	D	A	D	I	L	L	R	L	A	D
Template Known Secondary structure																		T		B		T	T	S		B											T												T			S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions