Return to main results Retrieve Phyre Job Id

Job DescriptionQ9S4W2
Confidence53.29%DateThu Jan 5 12:38:17 GMT 2012
Rank195Aligned Residues40
% Identity15%Templatec3ivpD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.. .......160.........170...
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Query Sequence  RRDMHPAEQIAGFRAMAQE. GKTPAQIGDLLGYSPRHVQRM
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Template Sequence  EDKYDFRALGLAIKEARKKQGLTREQVGAXIEIDPRYLTNI
Template Known Secondary structure  GG



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   5....10.........20.........30.........40.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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