Job Description Q9S4W2 Confidence 21.02% Date Thu Jan 5 12:38:17 GMT 2012 Rank 342 Aligned Residues 74 % Identity 15% Template c2k9sA_ PDB info PDB header:transcription Chain: A: PDB Molecule:arabinose operon regulatory protein; PDBTitle: solution structure of dna binding domain of e. coli arac Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.											.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.						.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	G	K	T	P	A	Q	I	G	D	L	L	G	Y	S	P	R	H	V	Q	R	M	L	K	L	A	.	D	L	A	P	V	.	.	.	.	.	.	.	.	.	.	I	L	D	A	L	A	E	D	R	I	T	T	E	H	C	Q	A	L	A	L	E	N	D	T	A	R	Q	V	Q	V	F	E	A	A	C	Q	S
Query Conservation																													.						.	.	.	.	.	.	.	.	.	.
Alig confidence																													.						.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		D	S	N	F	D	I	A	S	V	A	Q	H	V	C	L	S	P	S	R	L	S	H	L	F	R	Q	Q	L	G	I	S	V	L	S	W	R	E	D	Q	R	I	S	Q	A	K	L	L	L	S	T	T	R	M	P	I	A	T	V	G	R	N	V	G	F	D	D	Q	L	Y	F	S	R	V	F	K	K	C	.	.	.
Template Known Secondary structure			S	S										T	T	S														S	S																																T	T															.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	G	G	K	P	D	V	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	T	G	A	S	P	S	E	F
Template Known Secondary structure		.		S	S
Template Predicted Secondary structure		.
Template SS confidence
			95	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions