Return to main results Retrieve Phyre Job Id

Job DescriptionQ9S4W2
Confidence64.33%DateThu Jan 5 12:38:17 GMT 2012
Rank156Aligned Residues50
% Identity26%Templatec1l0oC_
PDB info PDB header:protein bindingChain: C: PDB Molecule:sigma factor; PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.. .. .....160.........170.........
Predicted Secondary structure 






.....

..





Query SS confidence 






















. . . . .

. .
























Query Sequence  ENGHRRDMHPAEQIAGFRAMAQE. . . . . GK. . TPAQIGDLLGYSPRHVQRMLKLADL
Query Conservation 

  
  
 
 
   
   
   .....
 ..   


   
 
   
  

 
  
Alig confidence 






















.....

..
























Template Conservation   





    
   

  
   
   


 

 



  
 
  


  

 
 
 
Template Sequence  DGTVKVSRSLKEMGNKIRKAKDELSKTRGRAPTVTEIADHLGISPEDVVLAQEAVRL
Template Known Secondary structure 



TTTS


TS

Template Predicted Secondary structure 












Template SS confidence 
























































   102.......110.........120.........130.........140.........150........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions