Job Description P32153 Confidence 99.19% Date Thu Jan 5 11:49:33 GMT 2012 Rank 65 Aligned Residues 250 % Identity 13% Template c3tc8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:leucine aminopeptidase; PDBTitle: crystal structure of a hypothetical zn-dependent exopeptidase2 (bdi_3547) from parabacteroides distasonis atcc 8503 at 1.06 a3 resolution Resolution 1.06 Å

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		3	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.													.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		I	E	L	L	Q	Q	L	C	E	A	.	.	.	S	A	V	S	G	D	E	Q	E	V	R	D	I	L	I	N	T	L	E	P	C	V	N	E	I	T	F	D	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	S	F	V	A	R	K	G	N	.	K	G	P	K	V	A	V	V	G	H	M	D	E	V	G
Query Conservation												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence												.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		Y	A	Y	V	A	N	Q	V	A	F	G	P	R	V	P	N	T	A	A	H	K	A	C	G	D	Y	L	A	S	E	L	K	R	F	G	A	K	V	Y	Q	Q	E	A	I	L	T	A	Y	D	G	T	K	L	E	A	R	N	I	I	G	S	F	D	P	E	N	S	K	R	V	L	L	F	A	H	W	D	S	R	P
Template Known Secondary structure											T					T	T	S																	T	T													T	T	S													S	T	T		S	S												S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		67	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		F	M	.	V	T	H	I	D	E	S	G	F	L	R	F	T	T	I	G	G	W	W	N	Q	S	M	L	N	H	R	V	T	I	R	T	H	K	G	V	K	I	P	G	V	I	G	S	V	A	P	H	A	L	T	E	K	Q	K	Q	Q	P	L	S	F	D	E	M	F	I	D	I	G	A	N	S	R	E	E	V	E
Query Conservation				.
Alig confidence				.															.	.																							.	.	.																																.	.	.	.	.
Template Conservation																			.	.																							.	.	.																																.	.	.	.	.
Template Sequence		Y	S	D	H	D	P	D	P	S	K	H	R	T	P	L	D	G	.	.	A	D	D	G	G	S	G	V	G	A	L	L	E	I	A	R	Q	I	G	Q	K	A	.	.	.	P	G	I	G	I	D	I	I	F	F	D	A	E	D	Y	G	T	P	E	F	V	T	D	Y	T	P	D	S	W	C	L	.	.	.	.	.
Template Known Secondary structure				T	T		S	S	G	G	G	T	T	S					.	.	T	T	T	T																	S		.	.	.		S	S									S		S		S			T	T			S			T	T		S			.	.	.	.	.
Template Predicted Secondary structure																			.	.																							.	.	.																																.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	G	V	E	I	G	N	F	I	S	P	E	A	N	F	A	C	W	G	E	D	K	V	V	G	K	A	L	D	N	R	I	G	C	A	M	M	A	E	L	L	Q	T	V	N	N	P	E	I	T	L	Y	G	V	G	S	V	E	E	E	V	G	L	R	G	A	Q	T	S	A	E	H	I	K	P	D	V	V	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	Q	F	W	A	K	N	P	H	V	P	N	Y	T	A	E	Y	G	I	L	L	D	X	V	G	G	K	N	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S		S	S	T	T				S							S			B	T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																									198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		V	L	D	T	A	V	A	G	D	V	P	G	I	D	N	I	K	Y	P	L	K	L	G	Q	G	P	G	L	M	L	F	D	K	R	Y	F	P	N	Q	K	L	V	A	A	L	K	S	C	A	A	H	N	D	L	P	L	Q	F	S	T	M	K	T	G	A	.	.	.	T	D	G	G	R	Y	N	V	M	G	G	G
Query Conservation																																																																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	F	K	E	Q	Q	S	L	R	A	A	A	P	I	V	E	X	V	W	S	A	A	R	D	L	G	Y	G	K	Y	F	I	N	A	A	G	G	A	I	T	D	D	H	Q	Y	V	I	S	G	R	.	.	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											T		T	T	T																					.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template SS confidence
																												228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.
		303	.	.	.	.	.									.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure								.	.	.	.	.	.	.	.												.	.	.
Query SS confidence								.	.	.	.	.	.	.	.												.	.	.
Query Sequence		R	P	V	V	A	L	.	.	.	.	.	.	.	.	C	L	P	T	R	Y	L	H	A	N	S	.	.	.	G	M	I	S	K	A	D	Y	E	A	L	L	T	L	I	R	G	F	L	T	T
Query Conservation								.	.	.	.	.	.	.	.												.	.	.
Alig confidence								.	.	.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		I	P	S	I	D	I	I	N	Y	D	P	E	S	K	T	G	F	A	S	Y	W	H	T	Q	K	D	N	X	E	N	I	D	R	E	T	L	K	A	A	G	Q	T	V	L	E	V	I	Y	N
Template Known Secondary structure									B			T	T	S	S	S	S	S		T	T	T	T	S	T	T		S	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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